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		<id>http://statgen.us/index.php?action=history&amp;feed=atom&amp;title=NGSMendelian2019</id>
		<title>NGSMendelian2019 - Revision history</title>
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		<updated>2026-04-05T18:23:09Z</updated>
		<subtitle>Revision history for this page on the wiki</subtitle>
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	<entry>
		<id>http://statgen.us/index.php?title=NGSMendelian2019&amp;diff=691&amp;oldid=prev</id>
		<title>Suzanne at 23:16, 16 August 2018</title>
		<link rel="alternate" type="text/html" href="http://statgen.us/index.php?title=NGSMendelian2019&amp;diff=691&amp;oldid=prev"/>
				<updated>2018-08-16T23:16:27Z</updated>
		
		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;table class='diff diff-contentalign-left'&gt;
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				&lt;td colspan='2' style=&quot;background-color: white; color:black; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black; text-align: center;&quot;&gt;Revision as of 23:16, 16 August 2018&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l17&quot; &gt;Line 17:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 17:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* Fax: +1 (713) 798-4012&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* Fax: +1 (713) 798-4012&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;−&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[https://statgen.research.bcm.edu/files/&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;2018&lt;/del&gt;/&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;11/info/Schedule_NGS_Mendelian_2018&lt;/del&gt;.pdf Click here for course schedule]&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[https://statgen.research.bcm.edu/files/&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;2019&lt;/ins&gt;/&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;Schedule_NGS_Mendelian_2019&lt;/ins&gt;.pdf Click here for course schedule]&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;−&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[https://statgen.research.bcm.edu/files/&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;2018&lt;/del&gt;/&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;11/info/Berlin_NGS_Mendelian_Course_Application_2018&lt;/del&gt;.&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;html &lt;/del&gt;Click here for the application form]&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[https://statgen.research.bcm.edu/files/&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;2019&lt;/ins&gt;/&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;Berlin_NGS_Mendelian_Course_Application_2019&lt;/ins&gt;.&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;htm &lt;/ins&gt;Click here for the application form]&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;−&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[https://statgen.research.bcm.edu/files/&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;2018/11/info&lt;/del&gt;/&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;Berlin_NGS_Mendelian_flyer_2018&lt;/del&gt;.pdf Click here for course flyer] (please post and distribute)&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[https://statgen.research.bcm.edu/files/&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;2019&lt;/ins&gt;/&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;Berlin_NGS_Mendelian_flyer_2019&lt;/ins&gt;.pdf Click here for course flyer] (please post and distribute)&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[https://www.mdc-berlin.de/directions Click here for maps and directions to the MDC]&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[https://www.mdc-berlin.de/directions Click here for maps and directions to the MDC]&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[http://www.bbb-berlin.de/en/gaestehaeuser.html Click here for the information on MDC Housing]&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[http://www.bbb-berlin.de/en/gaestehaeuser.html Click here for the information on MDC Housing]&amp;lt;br /&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Suzanne</name></author>	</entry>

	<entry>
		<id>http://statgen.us/index.php?title=NGSMendelian2019&amp;diff=682&amp;oldid=prev</id>
		<title>Zhihuiz at 21:34, 14 August 2018</title>
		<link rel="alternate" type="text/html" href="http://statgen.us/index.php?title=NGSMendelian2019&amp;diff=682&amp;oldid=prev"/>
				<updated>2018-08-14T21:34:18Z</updated>
		
		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;table class='diff diff-contentalign-left'&gt;
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				&lt;td colspan='2' style=&quot;background-color: white; color:black; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black; text-align: center;&quot;&gt;Revision as of 21:34, 14 August 2018&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l2&quot; &gt;Line 2:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 2:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;=Identifying Genes for Mendelian Traits using Next Generation Sequence Data=&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;=Identifying Genes for Mendelian Traits using Next Generation Sequence Data=&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;−&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;===November &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;5&lt;/del&gt;-&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;9&lt;/del&gt;, &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;2018&lt;/del&gt;&amp;lt;br /&amp;gt;Max Delbrück Center (MDC) for Molecular Medicine&amp;lt;br /&amp;gt;Berlin, Germany===&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;===November &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;11&lt;/ins&gt;-&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;15&lt;/ins&gt;, &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;2019&lt;/ins&gt;&amp;lt;br /&amp;gt;Max Delbrück Center (MDC) for Molecular Medicine&amp;lt;br /&amp;gt;Berlin, Germany===&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;−&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;The Identifying Genes for Mendelian Traits using Next Generation Sequence Data Course will be held at the [http://www.mdc-berlin.de/ MDC] in Berlin from November &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;5&lt;/del&gt;-&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;9&lt;/del&gt;, &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;2018&lt;/del&gt;. The goal of the course is to teach the course participants both theory and application of methods to identify genes for Mendelian diseases/traits using filtering methods, homozygosity mapping and linkage analysis.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;The Identifying Genes for Mendelian Traits using Next Generation Sequence Data Course will be held at the [http://www.mdc-berlin.de/ MDC] in Berlin from November &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;11&lt;/ins&gt;-&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;15&lt;/ins&gt;, &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;2019&lt;/ins&gt;. The goal of the course is to teach the course participants both theory and application of methods to identify genes for Mendelian diseases/traits using filtering methods, homozygosity mapping&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;, &lt;/ins&gt;and linkage analysis.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;−&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;Emphasis &lt;/del&gt;in this course is on strategies for gene mapping and variant/gene identification for Mendelian Traits. It will include theory as well as practical exercises. The exercises will be carried out using a variety of computer programs (e.g. Gemini, GeneHunter, GERP, Homozygosity Mapper, Integrative Genome Viewer, MERLIN, PhlyoP, Polyphen, SEQLinkage, Variant Mendelian Tools,) and with pencil and paper. TOPICS include: study design; linkage analysis and homozygosity mapping using genotype array and next generation sequence data (exome and whole genome), haplotype reconstruction, evaluating pedigree informativeness and power to detect linkage, vcf file annotation; generation of NGS data; identification of causal variants using filter approaches, variant annotation, evaluation of deleterious effects of variants and their functionality. The organizers and instructors for the course are [https://www.bcm.edu/research/labs/center-for-statistical-genetics/ Suzanne Leal] (Baylor College of Medicine) and [http://portal.ccg.uni-koeln.de/ccg/research/stat-gen-bioinformatics/ Michael Nothnagel] (University of Cologne).&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;The emphasis &lt;/ins&gt;in this course is on strategies for gene mapping and variant/gene identification for Mendelian Traits. It will include theory as well as practical exercises. The exercises will be carried out using a variety of computer programs (e.g. Gemini, GeneHunter, GERP, Homozygosity Mapper, Integrative Genome Viewer, MERLIN, PhlyoP, Polyphen, SEQLinkage, Variant Mendelian Tools,) and with pencil and paper. TOPICS include: study design; linkage analysis and homozygosity mapping using genotype array and next&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;-&lt;/ins&gt;generation sequence data (exome and whole genome), haplotype reconstruction, evaluating pedigree informativeness and power to detect linkage, vcf file annotation; generation of NGS data; identification of causal variants using filter approaches, variant annotation, evaluation of deleterious effects of variants and their functionality. The organizers and instructors for the course are [https://www.bcm.edu/research/labs/center-for-statistical-genetics/ Suzanne Leal] (Baylor College of Medicine) and [http://portal.ccg.uni-koeln.de/ccg/research/stat-gen-bioinformatics/ Michael Nothnagel] (University of Cologne).&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;−&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;The cost of the 5 day course is 975 EUR for researchers from an academic institution, and 1,950 EUR for individuals from private (for profit) companies. This fee covers tuition, Monday evening wine and cheese party and course related expenses (handouts, etc.) but not room, board or meals. Inexpensive housing is available for course participants at the MDC and nearby hotels. The maximum number of participants is 40.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;The cost of the 5&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;-&lt;/ins&gt;day course is 975 EUR for researchers from an academic institution, and 1,950 EUR for individuals from private (for profit) companies. This fee covers tuition, Monday evening wine and cheese party and course&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;-&lt;/ins&gt;related expenses (handouts, etc.) but not room, board or meals. Inexpensive housing is available for course participants at the MDC and nearby hotels. The maximum number of participants is 40.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;For additional information on the course please contact [mailto:sleal@bcm.edu?subject=Genetic%20Association%20Course%2C%20Berlin%202018 Suzanne Leal]:&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;For additional information on the course please contact [mailto:sleal@bcm.edu?subject=Genetic%20Association%20Course%2C%20Berlin%202018 Suzanne Leal]:&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;−&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;Application Deadline &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;June 30th&lt;/del&gt;, &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;2018&lt;/del&gt;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;Application Deadline &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;July 1st&lt;/ins&gt;, &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;2019&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* email: [mailto:sleal@bcm.edu;suzannemleal@gmail.com?subject=Genetic%20Association%20Course%20Berlin%202018 sleal@bcm.edu]&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;* email: [mailto:sleal@bcm.edu;suzannemleal@gmail.com?subject=Genetic%20Association%20Course%20Berlin%202018 sleal@bcm.edu]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Zhihuiz</name></author>	</entry>

	<entry>
		<id>http://statgen.us/index.php?title=NGSMendelian2019&amp;diff=382&amp;oldid=prev</id>
		<title>Suzanne: Created page with &quot;__NOTITLE__  =Identifying Genes for Mendelian Traits using Next Generation Sequence Data= ===November 5-9, 2018&lt;br /&gt;Max Delbrück Center (MDC) for Molecular Medicine&lt;br /&gt;Ber...&quot;</title>
		<link rel="alternate" type="text/html" href="http://statgen.us/index.php?title=NGSMendelian2019&amp;diff=382&amp;oldid=prev"/>
				<updated>2017-10-02T18:22:08Z</updated>
		
		<summary type="html">&lt;p&gt;Created page with &amp;quot;__NOTITLE__  =Identifying Genes for Mendelian Traits using Next Generation Sequence Data= ===November 5-9, 2018&amp;lt;br /&amp;gt;Max Delbrück Center (MDC) for Molecular Medicine&amp;lt;br /&amp;gt;Ber...&amp;quot;&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;__NOTITLE__&lt;br /&gt;
&lt;br /&gt;
=Identifying Genes for Mendelian Traits using Next Generation Sequence Data=&lt;br /&gt;
===November 5-9, 2018&amp;lt;br /&amp;gt;Max Delbrück Center (MDC) for Molecular Medicine&amp;lt;br /&amp;gt;Berlin, Germany===&lt;br /&gt;
The Identifying Genes for Mendelian Traits using Next Generation Sequence Data Course will be held at the [http://www.mdc-berlin.de/ MDC] in Berlin from November 5-9, 2018. The goal of the course is to teach the course participants both theory and application of methods to identify genes for Mendelian diseases/traits using filtering methods, homozygosity mapping and linkage analysis.&lt;br /&gt;
&lt;br /&gt;
Emphasis in this course is on strategies for gene mapping and variant/gene identification for Mendelian Traits. It will include theory as well as practical exercises. The exercises will be carried out using a variety of computer programs (e.g. Gemini, GeneHunter, GERP, Homozygosity Mapper, Integrative Genome Viewer, MERLIN, PhlyoP, Polyphen, SEQLinkage, Variant Mendelian Tools,) and with pencil and paper. TOPICS include: study design; linkage analysis and homozygosity mapping using genotype array and next generation sequence data (exome and whole genome), haplotype reconstruction, evaluating pedigree informativeness and power to detect linkage, vcf file annotation; generation of NGS data; identification of causal variants using filter approaches, variant annotation, evaluation of deleterious effects of variants and their functionality. The organizers and instructors for the course are [https://www.bcm.edu/research/labs/center-for-statistical-genetics/ Suzanne Leal] (Baylor College of Medicine) and [http://portal.ccg.uni-koeln.de/ccg/research/stat-gen-bioinformatics/ Michael Nothnagel] (University of Cologne).&lt;br /&gt;
&lt;br /&gt;
The cost of the 5 day course is 975 EUR for researchers from an academic institution, and 1,950 EUR for individuals from private (for profit) companies. This fee covers tuition, Monday evening wine and cheese party and course related expenses (handouts, etc.) but not room, board or meals. Inexpensive housing is available for course participants at the MDC and nearby hotels. The maximum number of participants is 40.&lt;br /&gt;
&lt;br /&gt;
For additional information on the course please contact [mailto:sleal@bcm.edu?subject=Genetic%20Association%20Course%2C%20Berlin%202018 Suzanne Leal]:&lt;br /&gt;
&lt;br /&gt;
Application Deadline June 30th, 2018&lt;br /&gt;
&lt;br /&gt;
* email: [mailto:sleal@bcm.edu;suzannemleal@gmail.com?subject=Genetic%20Association%20Course%20Berlin%202018 sleal@bcm.edu]&lt;br /&gt;
* Tel: +1 (713) 798-4011&lt;br /&gt;
* Fax: +1 (713) 798-4012&lt;br /&gt;
&lt;br /&gt;
[https://statgen.research.bcm.edu/files/2018/11/info/Schedule_NGS_Mendelian_2018.pdf Click here for course schedule]&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://statgen.research.bcm.edu/files/2018/11/info/Berlin_NGS_Mendelian_Course_Application_2018.html Click here for the application form]&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://statgen.research.bcm.edu/files/2018/11/info/Berlin_NGS_Mendelian_flyer_2018.pdf Click here for course flyer] (please post and distribute)&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://www.mdc-berlin.de/directions Click here for maps and directions to the MDC]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://www.bbb-berlin.de/en/gaestehaeuser.html Click here for the information on MDC Housing]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://www.visitberlin.de/en Click here for Berlin tourist information]&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://www.facebook.com/statgencourses/?ref=aymt_homepage_panel Click here and like us on Facebook]&amp;lt;br /&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
[https://statgen.research.bcm.edu/index.php/Genassoc2017 Click here for photos and datasets from the Genetic Association Course – Berlin: July 2017]&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://statgen.research.bcm.edu/index.php/ComplexNGS2017 Click here for photos and datasets from the Complex Trait Analysis of NGS Data Course – Berlin: March 2017]&amp;lt;br /&amp;gt;&lt;br /&gt;
--&amp;gt;&lt;br /&gt;
[https://statgen.research.bcm.edu/index.php/Genassoc2016 Click here for photos and datasets from the Genetic Association Course – Berlin: September 2016]&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://statgen.research.bcm.edu/index.php/ComplexNGS2016 Click here for photos and datasets from the Analysis of Next Generation Sequence Data for Complex Traits Course – Berlin: July 2016]&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://statgen.research.bcm.edu/index.php/2015SeptMDC Click here for photos and datasets from the Analysis of Next Generation Sequence Data Mendelian Traits - Berlin: September 2015]&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://statgen.research.bcm.edu/index.php/2015JuneMDC Click here for photos and datasets from the Genetic Association Course - Berlin: June 2015]&amp;lt;br /&amp;gt;&lt;br /&gt;
[https://statgen.research.bcm.edu/index.php/2015MarchMDC Click here for photos and datasets from the Analysis of Next Generation Sequence Data Complex Traits - Berlin: March 2015]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=89 Click here for photos and datasets from the Genetic Association Course - Berlin: June 2015]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=88 Click here for photos and datasets from the Complex Trait Analysis of NGS Data Course - Berlin: March 2015]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=87 Click here for photos and datasets from the Next Generation Sequence Data Analysis Course - Berlin: June 2014]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=86 Click here for photos and datasets from the Genetic Association Course - Berlin: March 2014]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=85 Click here for photos and datasets from the Genetic Association Course - Berlin: June 2013]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=84 Click here for photos and datasets from the Basic Gene Mapping Course - Berlin: November 2012]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=83 Click here for photos from the Genetic Association Course - Berlin: July 2012]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=81 Click here for photos from the Basic Gene Mapping Course - Berlin: November 2011]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=80 Click here for photos from the Genetic Association Course - Berlin: July 2011]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=63 Click here for photos from the Basic Gene Mapping Course - Berlin: October 2010]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=62 Click here for photos from the Genetic Association Course - Berlin: May 2010]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=90 Click here for photos from the Basic Gene Mapping Course - Berlin: November 2009]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=91 Click here for photos from the Basic Gene Mapping Course - Berlin: July 2008]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=92 Click here for photos from the Basic Gene Mapping Course - Berlin: July 2007]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=93 Click here for photos from the Basic Gene Mapping Course - Berlin: July 2006]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=94 Click here for photos from the Basic Gene Mapping Course - Berlin: July 2005]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=95 Click here for photos from the Basic Gene Mapping Course - Berlin: July 2004]&amp;lt;br /&amp;gt;&lt;br /&gt;
[http://portal.ccg.uni-koeln.de/ccg/index.php?id=96 Click here for photos from the Basic Gene Mapping Course - Berlin: July 2003]&lt;/div&gt;</summary>
		<author><name>Suzanne</name></author>	</entry>

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